De novo Assembly of Bacteria Genome Nanopore data


Project

Testing_case


Bioinformatics workflow


Nanopore sequencing data QC Report

QC detail

Summary

Mean read length 17,986
Mean read quality 13
Median read length 13,805
Median read quality 13
Number of reads 50,153
Read length N50 20,435
Total bases 902,042,284
>Q5_reads 50,153
>Q5_bases 902.0Mb
>Q7_reads 50,153
>Q7_bases 902.0Mb
>Q10_reads 50,153
>Q10_bases 902.0Mb
>Q12_reads 50,153
>Q12_bases 902.0Mb
>Q15_reads 1,704
>Q15_bases 26.3Mb

More detail could be found in NanoPlot_QC/ folder.

LengthvsQualityScatterPlot_dot